Two-Dimensional Differential Gel Electrophoresis to Identify Protein Biomarkers in Amniotic Fluid of Edwards Syndrome (Trisomy 18) Pregnancies

PLoS One. 2016 Jan 11;11(1):e0145908. doi: 10.1371/journal.pone.0145908. eCollection 2016.

Abstract

Background: Edwards syndrome (ES) is a severe chromosomal abnormality with a prevalence of about 0.8 in 10,000 infants born alive. The aims of this study were to identify candidate proteins associated with ES pregnancies from amniotic fluid supernatant (AFS) using proteomics, and to explore the role of biological networks in the pathophysiology of ES.

Methods: AFS from six second trimester pregnancies with ES fetuses and six normal cases were included in this study. Fluorescence-based two-dimensional difference gel electrophoresis (2D-DIGE) and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF/MS) were used for comparative proteomic analysis. The identified proteins were further validated by Western blotting and the role of biological networks was analyzed.

Results: Twelve protein spots were differentially expressed by more than 1.5-fold in the AFS of the ES pregnancies. MALDI-TOF/MS identified one up-regulated protein: apolipoprotein A1 (ApoA1), and four under-regulated proteins: vitamin D binding protein (VDBP), alpha-1-antitrypsin (A1AT), insulin-like growth factor-binding protein 1 (IGFBP-1), and transthyretin (TTR). Western blot and densitometric analysis of ApoA1, A1AT, IGFBP-1, and TTR confirmed the alteration of these proteins in the amniotic fluid samples. Biological network analysis revealed that the proteins of the ES AFS were involved mainly in lipid and hormone metabolism, immune response, and cardiovascular disease.

Conclusions: These five proteins may be involved in the pathogenesis of ES. Further studies are needed to explore.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amniotic Fluid / chemistry*
  • Apolipoprotein A-I / genetics
  • Apolipoprotein A-I / metabolism
  • Biomarkers / metabolism
  • Chromosomes, Human, Pair 18 / genetics
  • Female
  • Fetus
  • Gene Expression Regulation
  • Humans
  • Insulin-Like Growth Factor Binding Protein 1 / genetics
  • Insulin-Like Growth Factor Binding Protein 1 / metabolism
  • Metabolic Networks and Pathways
  • Prealbumin / genetics
  • Prealbumin / metabolism
  • Pregnancy
  • Pregnancy Trimester, Second
  • Prenatal Diagnosis / methods*
  • Protein Interaction Mapping
  • Proteomics / methods
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Trisomy / diagnosis*
  • Trisomy / genetics*
  • Trisomy / pathology
  • Trisomy 18 Syndrome
  • Two-Dimensional Difference Gel Electrophoresis
  • Vitamin D-Binding Protein / genetics
  • Vitamin D-Binding Protein / metabolism
  • alpha 1-Antitrypsin / genetics
  • alpha 1-Antitrypsin / metabolism

Substances

  • Apolipoprotein A-I
  • Biomarkers
  • IGFBP1 protein, human
  • Insulin-Like Growth Factor Binding Protein 1
  • Prealbumin
  • SERPINA1 protein, human
  • Vitamin D-Binding Protein
  • alpha 1-Antitrypsin

Grants and funding

This study was supported by the Chang Gung Memorial Hospital Research Grant CMRPG870171. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.