Structure of methionine γ-lyase from Clostridium sporogenes

Acta Crystallogr F Struct Biol Commun. 2016 Jan;72(Pt 1):65-71. doi: 10.1107/S2053230X15023869. Epub 2016 Jan 1.

Abstract

Methionine γ-lyase (MGL) is a pyridoxal 5'-phosphate-dependent enzyme that catalyzes the γ-elimination reaction of L-methionine. The enzyme is a promising target for therapeutic intervention in some anaerobic pathogens and has attracted interest as a potential cancer treatment. The crystal structure of MGL from Clostridium sporogenes has been determined at 2.37 Å resolution. The fold of the protein is similar to those of homologous enzymes from Citrobacter freundii, Entamoeba histolytica, Pseudomonas putida and Trichomonas vaginalis. A comparison of these structures revealed differences in the conformation of two flexible regions of the N- and C-terminal domains involved in the active-site architecture.

Keywords: Clostridium sporogenes; active site; methionine γ-lyase; pyridoxal 5′-phosphate-binding site; tetrameric contacts.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Carbon-Sulfur Lyases / chemistry*
  • Catalytic Domain
  • Clostridium / enzymology*
  • Crystallization
  • Crystallography, X-Ray
  • Hydrogen Bonding
  • Kinetics
  • Methionine / chemistry
  • Models, Molecular
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Protein Interaction Domains and Motifs
  • Protein Structure, Quaternary
  • Pyridoxal Phosphate / chemistry

Substances

  • Bacterial Proteins
  • Pyridoxal Phosphate
  • Methionine
  • Carbon-Sulfur Lyases
  • L-methionine gamma-lyase