Structural evolution of the 4/1 genes and proteins in non-vascular and lower vascular plants

Biochimie. 2015 Dec:119:125-36. doi: 10.1016/j.biochi.2015.10.019. Epub 2015 Nov 2.

Abstract

The 4/1 protein of unknown function is encoded by a single-copy gene in most higher plants. The 4/1 protein of Nicotiana tabacum (Nt-4/1 protein) has been shown to be alpha-helical and predominantly expressed in conductive tissues. Here, we report the analysis of 4/1 genes and the encoded proteins of lower land plants. Sequences of a number of 4/1 genes from liverworts, lycophytes, ferns and gymnosperms were determined and analyzed together with sequences available in databases. Most of the vascular plants were found to encode Magnoliophyta-like 4/1 proteins exhibiting previously described gene structure and protein properties. Identification of the 4/1-like proteins in hornworts, liverworts and charophyte algae (sister lineage to all land plants) but not in mosses suggests that 4/1 proteins are likely important for plant development but not required for a primary metabolic function of plant cell.

Keywords: Cloning; Gene evolution; Plant 4/1 gene; Protein phylogeny; Protein structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Bryophyta / genetics
  • Bryophyta / metabolism
  • Charophyceae / genetics
  • Charophyceae / metabolism
  • Computational Biology
  • Conserved Sequence
  • Cycadopsida / genetics
  • Cycadopsida / metabolism
  • Databases, Genetic
  • Evolution, Molecular*
  • Genes, Plant*
  • Genomic Library
  • Magnoliopsida / genetics
  • Magnoliopsida / metabolism
  • Models, Genetic*
  • Molecular Sequence Data
  • Phylogeny
  • Plant Development
  • Plant Proteins / chemistry
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Protein Conformation
  • Sequence Alignment
  • Viridiplantae / genetics*
  • Viridiplantae / metabolism

Substances

  • Plant Proteins