Global Analysis of Predicted G Protein-Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa

G3 (Bethesda). 2015 Oct 13;5(12):2729-43. doi: 10.1534/g3.115.020974.

Abstract

G protein-coupled receptors (GPCRs) regulate facets of growth, development, and environmental sensing in eukaryotes, including filamentous fungi. The largest predicted GPCR class in these organisms is the Pth11-related, with members similar to a protein required for disease in the plant pathogen Magnaporthe oryzae. However, the Pth11-related class has not been functionally studied in any filamentous fungal species. Here, we analyze phenotypes in available mutants for 36 GPCR genes, including 20 Pth11-related, in the model filamentous fungus Neurospora crassa. We also investigate patterns of gene expression for all 43 predicted GPCR genes in available datasets. A total of 17 mutants (47%) possessed at least one growth or developmental phenotype. We identified 18 mutants (56%) with chemical sensitivity or nutritional phenotypes (11 uniquely), bringing the total number of mutants with at least one defect to 28 (78%), including 15 mutants (75%) in the Pth11-related class. Gene expression trends for GPCR genes correlated with the phenotypes observed for many mutants and also suggested overlapping functions for several groups of co-transcribed genes. Several members of the Pth11-related class have phenotypes and/or are differentially expressed on cellulose, suggesting a possible role for this gene family in plant cell wall sensing or utilization.

Keywords: G protein−coupled receptors; Heterotrimeric G proteins; filamentous fungi; functional genomics; signal transduction.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Cluster Analysis
  • Gene Expression Profiling*
  • Gene Expression Regulation, Fungal*
  • Genetic Association Studies
  • Multigene Family
  • Mutation
  • Neurospora crassa / classification
  • Neurospora crassa / genetics*
  • Neurospora crassa / metabolism
  • Phenotype
  • Phylogeny
  • Receptors, G-Protein-Coupled / genetics*
  • Receptors, G-Protein-Coupled / metabolism
  • Reproduction, Asexual / genetics
  • Signal Transduction

Substances

  • Receptors, G-Protein-Coupled