Purification and Bicelle Crystallization for Structure Determination of the E. coli Outer Membrane Protein TamA

Methods Mol Biol. 2015:1329:259-70. doi: 10.1007/978-1-4939-2871-2_20.

Abstract

TamA is an Omp85 protein involved in autotransporter assembly in the outer membrane of Escherichia coli. It comprises a C-terminal 16-stranded transmembrane β-barrel as well as three periplasmic POTRA domains, and is a challenging target for structure determination. Here, we present a method for crystal structure determination of TamA, including recombinant expression in E. coli, detergent extraction, chromatographic purification, and bicelle crystallization in combination with seeding. As a result, crystals in space group P21212 are obtained, which diffract to 2.3 Å resolution. This protocol also serves as a template for structure determination of other outer membrane proteins, in particular of the Omp85 family.

Keywords: Autotransporter; Bacterial outer membrane; Bicelle crystallization; Membrane protein purification; Omp85; Outer membrane protein; TamA; X-ray crystallography; β-Barrel.

MeSH terms

  • Bacterial Outer Membrane Proteins / chemistry*
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / isolation & purification*
  • Crystallization / methods*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / isolation & purification*
  • Micelles*
  • Plasmids / genetics

Substances

  • Bacterial Outer Membrane Proteins
  • Escherichia coli Proteins
  • Micelles