Inhibition of cyclin-dependent kinase CDK1 by oxindolimine ligands and corresponding copper and zinc complexes

J Biol Inorg Chem. 2015 Oct;20(7):1205-17. doi: 10.1007/s00775-015-1300-4. Epub 2015 Sep 28.

Abstract

Oxindolimine-copper(II) and zinc(II) complexes that previously have shown to induce apoptosis, with DNA and mitochondria as main targets, exhibit here significant inhibition of kinase CDK1/cyclin B protein. Copper species are more active than the corresponding zinc, and the free ligand shows to be less active, indicating a major influence of coordination in the process, and a further modulation by the coordinated ligand. Molecular docking and classical molecular dynamics provide a better understanding of the effectiveness and kinase inhibition mechanism by these compounds, showing that the metal complex provides a stronger interaction than the free ligand with the ATP-binding site. The metal ion introduces charge in the oxindole species, giving it a more rigid conformation that then becomes more effective in its interactions with the protein active site. Analogous experiments resulted in no significant effect regarding phosphatase inhibition. These results can explain the cytotoxicity of these metal complexes towards different tumor cells, in addition to its capability of binding to DNA, and decreasing membrane potential of mitochondria.

Keywords: Cytotoxicity mechanism; Kinase inhibitors; Molecular docking; Molecular dynamics; Oxindolimine-metal complexes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Coordination Complexes / chemistry*
  • Coordination Complexes / pharmacology*
  • Copper / chemistry*
  • Cyclin-Dependent Kinases / antagonists & inhibitors*
  • Drug Stability
  • Enzyme Activation / drug effects
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology
  • Imines / chemistry
  • Imines / pharmacology*
  • Indoles / chemistry
  • Indoles / pharmacology
  • Ligands
  • Models, Molecular
  • Molecular Docking Simulation*
  • Oxindoles
  • Zinc / chemistry*

Substances

  • Coordination Complexes
  • Enzyme Inhibitors
  • Imines
  • Indoles
  • Ligands
  • Oxindoles
  • 2-oxindole
  • Copper
  • Cyclin-Dependent Kinases
  • Zinc