To understand the organic matter pollution characteristic and its relationship with nitrogen, phosphorus and other nutrients in sediments of high organic matter type of urban shallow lakes, the organic matter content, light fraction organic matter (LFOM), heavy fraction organic matter (HFOM), and nitrogen and phosphorus contents were investigated in eight different regions of West Lake, Hangzhou. The results showed that, the organic matter content of the west lake sediment was 28-251 g x kg(-1), belonging to typical high organic matter sediment. The difference of organic matter content in different lake sediments was very big. The sediments located at the input site of water diversion engineering had significantly lower organic content than the rest regions. The LFOM content of West Lake sediment ranged 0.57-9.17 g x kg(-1), which averagely occupied 2.83% of the total organic matter, and the HFOM content ranged 5.35-347.41 g x kg(-1), which occupied more than 90% of the total organic matter. Compared to other shallow lakes located in China, sediments of West Lake had significantly high percentage of HFOM/LFOM ratio. But the HFOM content was obviously on the high side, reflecting the west lake as an urban lake with a long history, as well as high organic matter pollution load and sediment humification degree. Both the content and the ratio of LFOM/HFOM in sediment were related to nitrogen and phosphorus contents in sediment. This suggested that the composition of organic matter in West Lake sediments had potential control ability for the internal loading of N and P of the lake.