Improved Low-Rank Filtering of Magnetic Resonance Spectroscopic Imaging Data Corrupted by Noise and B₀ Field Inhomogeneity

IEEE Trans Biomed Eng. 2016 Apr;63(4):841-9. doi: 10.1109/TBME.2015.2476499. Epub 2015 Sep 3.

Abstract

Goal: To improve the signal-to-noise ratio (SNR) of magnetic resonance spectroscopic imaging (MRSI) data.

Methods: A low-rank filtering method recently proposed for denoising MRSI data is extended by: 1) incorporating tissue boundary constraints to enable local low-rank filtering, and 2) integrating B0 field inhomogeneity correction by rank-minimization to make the low-rank model more effective.

Results: The proposed method was validated using both simulated and in vivo MRSI data. Its denoising performance is also compared with an upper bound based on the constrained Cramér-Rao lower bound for low-rank filtering.

Conclusion: Low-rank filtering can effectively improve the SNR of MRSI data corrupted by both noise and B0 field inhomogeneity.

Significance: The proposed low-rank filtering method will enhance the practical utility of high-resolution MRSI, where SNR has been a limiting factor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Brain / diagnostic imaging*
  • Humans
  • Image Processing, Computer-Assisted / methods*
  • Magnetic Resonance Imaging / methods*
  • Signal Processing, Computer-Assisted*
  • Signal-To-Noise Ratio