TRIzol and Alu qPCR-based quantification of metastatic seeding within the skeleton

Sci Rep. 2015 Aug 14:5:12635. doi: 10.1038/srep12635.

Abstract

Current methods for detecting disseminated tumor cells in the skeleton are limited by expense and technical complexity. We describe a simple and inexpensive method to quantify, with single cell sensitivity, human metastatic cancer in the mouse skeleton, concurrently with host gene expression, using TRIzol-based DNA/RNA extraction and Alu sequence qPCR amplification. This approach enables precise quantification of tumor cells and corresponding host gene expression during metastatic colonization in xenograft models.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alu Elements / genetics
  • Animals
  • Biomarkers, Tumor / genetics*
  • Bone Neoplasms / genetics*
  • Bone Neoplasms / pathology
  • Bone Neoplasms / secondary*
  • Cell Line, Tumor
  • DNA, Neoplasm / genetics
  • DNA, Neoplasm / isolation & purification
  • Gene Expression Profiling / methods*
  • Genetic Markers / genetics
  • Guanidines / chemistry
  • Mice
  • Mice, Nude
  • Phenols / chemistry
  • RNA, Neoplasm / genetics
  • RNA, Neoplasm / isolation & purification
  • Real-Time Polymerase Chain Reaction / methods*
  • Reproducibility of Results
  • Sensitivity and Specificity

Substances

  • Biomarkers, Tumor
  • DNA, Neoplasm
  • Genetic Markers
  • Guanidines
  • Phenols
  • RNA, Neoplasm
  • trizol