Mapping Mechanical Force Propagation through Biomolecular Complexes

Nano Lett. 2015 Nov 11;15(11):7370-6. doi: 10.1021/acs.nanolett.5b02727. Epub 2015 Aug 19.

Abstract

Here we employ single-molecule force spectroscopy with an atomic force microscope (AFM) and steered molecular dynamics (SMD) simulations to reveal force propagation pathways through a mechanically ultrastable multidomain cellulosome protein complex. We demonstrate a new combination of network-based correlation analysis supported by AFM directional pulling experiments, which allowed us to visualize stiff paths through the protein complex along which force is transmitted. The results implicate specific force-propagation routes nonparallel to the pulling axis that are advantageous for achieving high dissociation forces.

Keywords: Force propagation; cohesin−dockerin; network analysis; single molecule force spectroscopy; steered molecular dynamics.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Mechanical Phenomena
  • Microscopy, Atomic Force
  • Molecular Dynamics Simulation
  • Multiprotein Complexes / chemistry
  • Multiprotein Complexes / ultrastructure*
  • Proteins / chemistry
  • Proteins / ultrastructure*
  • Spectrum Analysis

Substances

  • Multiprotein Complexes
  • Proteins