Development of a rapid HRM genotyping method for detection of dog-derived Giardia lamblia

Parasitol Res. 2015 Nov;114(11):4081-6. doi: 10.1007/s00436-015-4636-3. Epub 2015 Jul 28.

Abstract

Giardia lamblia is a zoonotic flagellate protozoan in the intestine of human and many mammals including dogs. To assess a threat of dog-derived G. lamblia to humans, the common dog-derived G. lamblia assemblages A, C, and D were genotyped by high-resolution melting (HRM) technology. According to β-giardin gene sequence, the qPCR-HRM primers BG5 and BG7 were designed. A series of experiments on the stability, sensitivity, and accuracy of the HRM method were also tested. Results showed that the primers BG5 and BG7 could distinguish among three assemblages A, C, and D, which Tm value differences were about 1 °C to each other. The melting curves of intra-assay reproducibility were almost coincided, and those of inter-assay reproducibility were much the same shape. The lowest detection concentration was about 5 × 10(-6)-ng/μL sample. The genotyping results from 21 G. lamblia samples by the HRM method were in complete accordance with sequencing results. It is concluded that the HRM genotyping method is rapid, stable, specific, highly sensitive, and suitable for clinical detection and molecular epidemiological survey of dog-derived G. lamblia.

Keywords: Dog; Genotyping; Giardia lamblia; HRM; β-Giardin gene.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA / chemistry
  • DNA / genetics
  • DNA Primers / genetics
  • Dog Diseases / diagnosis
  • Dog Diseases / parasitology*
  • Dogs
  • Feces / parasitology
  • Genotyping Techniques / methods*
  • Giardia lamblia / classification
  • Giardia lamblia / genetics
  • Giardia lamblia / isolation & purification*
  • Giardiasis / diagnosis
  • Giardiasis / parasitology
  • Giardiasis / veterinary*
  • Humans
  • Molecular Epidemiology
  • Transition Temperature

Substances

  • DNA Primers
  • DNA