The structure of a GFP-based antibody (fluorobody) to TLH, a toxin from Vibrio parahaemolyticus

Acta Crystallogr F Struct Biol Commun. 2015 Jul;71(Pt 7):913-8. doi: 10.1107/S2053230X15008845. Epub 2015 Jun 27.

Abstract

A fluorobody is a manmade hybrid molecule that is composed of green fluorescent protein (GFP) and a fragment of antibody, which combines the affinity and specificity of an antibody with the visibility of a GFP. It is able to provide a real-time indication of binding while avoiding the use of tags and secondary binding reagents. Here, the expression, purification and crystal structure of a recombinant fluorobody for TLH (thermolabile haemolysin), a toxin from the lethal food-borne disease bacterium Vibrio parahaemolyticus, are presented. This is the first structure of a fluorobody to be reported. Crystals belonging to space group P4(3)2(1)2, with unit-cell parameters a = b = 63.35, c = 125.90 Å, were obtained by vapour diffusion in hanging drops and the structure was refined to an Rfree of 16.7% at 1.5 Å resolution. The structure shows a CDR loop of the antibody on the GFP scaffold.

Keywords: CDR3; GFP scaffold; TLH; fluorobody.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antibodies, Bacterial / chemistry*
  • Antibodies, Bacterial / metabolism
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / isolation & purification
  • Bacterial Proteins / metabolism
  • Green Fluorescent Proteins / chemistry*
  • Green Fluorescent Proteins / metabolism
  • Hemolysin Proteins / chemistry*
  • Hemolysin Proteins / isolation & purification
  • Hemolysin Proteins / metabolism
  • Molecular Sequence Data
  • Protein Structure, Secondary
  • Vibrio parahaemolyticus*

Substances

  • Antibodies, Bacterial
  • Bacterial Proteins
  • Hemolysin Proteins
  • hemolysin, Vibrio
  • Green Fluorescent Proteins

Associated data

  • PDB/4XGY