DNA-based methodologies for the quantification of live and dead cells in formulated biocontrol products based on Pantoea agglomerans CPA-2

Int J Food Microbiol. 2015 Oct 1:210:79-83. doi: 10.1016/j.ijfoodmicro.2015.06.013. Epub 2015 Jun 20.

Abstract

Pantoea agglomerans strain CPA-2 is an effective biocontrol agent (BCA) against the major postharvest pathogens present on pome and citrus fruits. Dehydration, such as freeze-drying, spray-drying and fluidized bed drying is one of the best ways to formulate BCAs. In this work, the survival of CPA-2 cells after formulation was determined by dilution plating and molecular methods as qPCR alone and combined with a sample pretreatment with a propidium monoazide dye (PMA-qPCR) and they were used to calculate treatment concentrations in efficacy trials on postharvest oranges. Furthermore, no significant differences in CPA-2 survival were observed as determined by dilution plating and PMA-qPCR after both the freeze drying and fluidized bed drying processes; however, an interesting significant difference was observed in the spray dried product comparing all quantitative methods. A difference of 0.48 and 2.17 log10 CFU or cells g/dw was observed among PMA-qPCR with qPCR and dilution plating, respectively. According to our study, dilution plating was shown to be an unreliable tool for monitoring the survival of CPA-2 after spray drying. In contrast, the combination of PMA and qPCR enabled a quick and unequivocal methodology to enumerate viable and VBNC CPA-2 cells under stress-dried conditions. Efficacy trials showed that, after 3 days, spray drying formulation rehydrated with 10% non-fat skimmed milk (NFSM) was as effective as fresh cells to control Penicillium digitatum in oranges.

Keywords: Bed fluidized-drying; Dilution plating; Freeze-drying; PMA; Spray-drying; Survival; qPCR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Azides / pharmacology
  • Bacterial Load / methods*
  • Citrus / microbiology*
  • Freeze Drying
  • Microbial Interactions*
  • Microbial Viability / drug effects
  • Pantoea / drug effects
  • Pantoea / genetics
  • Pantoea / physiology*
  • Penicillium / physiology
  • Pest Control, Biological / methods*
  • Propidium / analogs & derivatives
  • Propidium / pharmacology
  • Real-Time Polymerase Chain Reaction

Substances

  • Azides
  • propidium monoazide
  • Propidium