Uncultivated thermophiles: current status and spotlight on 'Aigarchaeota'

Curr Opin Microbiol. 2015 Jun:25:136-45. doi: 10.1016/j.mib.2015.06.008. Epub 2015 Jun 23.

Abstract

Meta-analysis of cultivation-independent sequence data shows that geothermal systems host an abundance of novel organisms, representing a vast unexplored phylogenetic and functional diversity among yet-uncultivated thermophiles. A number of thermophiles have recently been interrogated using metagenomic and/or single-cell genomic approaches, including members of taxonomic groups that inhabit both thermal and non-thermal environments, such as 'Acetothermia' (OP1) and 'Atribacteria' (OP9/JS1), as well as the exclusively thermophilic lineages 'Korarchaeota', 'Calescamantes' (EM19), 'Fervidibacteria' (OctSpA1-106), and 'Aigarchaeota' (HWCG-I). The 'Aigarchaeota', a sister lineage to the Thaumarchaeota, likely includes both hyperthermophiles and moderate thermophiles. They inhabit terrestrial, marine, and subsurface thermal environments and comprise at least nine genus-level lineages, several of which are globally distributed.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Archaea / classification*
  • Archaea / genetics
  • Archaea / growth & development
  • Archaea / physiology*
  • Bacteria / classification
  • Bacteria / genetics
  • Bacteria / growth & development
  • Biodiversity*
  • Hot Springs / microbiology*
  • Hot Temperature
  • Metagenomics
  • Phylogeny
  • RNA, Ribosomal, 16S
  • Water Microbiology*

Substances

  • RNA, Ribosomal, 16S