SAMHD1 specifically restricts retroviruses through its RNase activity

Retrovirology. 2015 Jun 2:12:46. doi: 10.1186/s12977-015-0174-4.

Abstract

Background: Human SAMHD1 possesses dual enzymatic functions. It acts as both a dGTP-dependent triphosphohydrolase and as an exoribonuclease. The dNTPase function depletes the cellular dNTP pool, which is required for retroviral reverse transcription in differentiated myeloid cells and resting CD4(+) T cells; thus this activity mainly plays a role in SAMHD1-mediated retroviral restriction. However, a recent study demonstrated that SAMHD1 directly targets HIV-1 genomic RNA via its RNase activity, and that this function (rather than dNTPase activity) is sufficient for HIV-1 restriction. While HIV-1 genomic RNA is a potent target for SAMHD1 during viral infection, the specificity of SAMHD1-mediated RNase activity during infection by other viruses is unclear.

Results: The results of the present study showed that SAMHD1 specifically degrades retroviral genomic RNA in monocyte-derived macrophage-like cells and in primary monocyte-derived macrophages. Consistent with this, SAMHD1 selectively restricted retroviral replication, but did not affect the replication of other common non-retro RNA genome viruses, suggesting that the RNase-mediated antiviral function of SAMHD1 is limited to retroviruses. In addition, neither inhibiting reverse transcription by treatment with several reverse transcriptase inhibitors nor infection with reverse transcriptase-defective HIV-1 altered RNA levels after viral challenge, indicating that the retrovirus-specific RNase function is not dependent on processes associated with retroviral reverse transcription.

Conclusions: The results presented herein suggest that the RNase activity of SAMHD1 is sufficient to control the replication of retroviruses, but not that of non-retro RNA viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Host-Pathogen Interactions*
  • Humans
  • Hydrolysis
  • Immunity, Innate*
  • Macrophages / immunology
  • Macrophages / virology
  • Monomeric GTP-Binding Proteins / metabolism*
  • RNA, Viral / metabolism*
  • Retroviridae / immunology*
  • Retroviridae / physiology
  • Ribonucleases / metabolism*
  • SAM Domain and HD Domain-Containing Protein 1
  • Virus Replication*

Substances

  • RNA, Viral
  • Ribonucleases
  • SAM Domain and HD Domain-Containing Protein 1
  • SAMHD1 protein, human
  • Monomeric GTP-Binding Proteins