GENERAL CONTROL NONREPRESSED PROTEIN5-Mediated Histone Acetylation of FERRIC REDUCTASE DEFECTIVE3 Contributes to Iron Homeostasis in Arabidopsis

Plant Physiol. 2015 Aug;168(4):1309-20. doi: 10.1104/pp.15.00397. Epub 2015 May 22.

Abstract

Iron homeostasis is essential for plant growth and development. Here, we report that a mutation in GENERAL CONTROL NONREPRESSED PROTEIN5 (GCN5) impaired iron translocation from the root to the shoot in Arabidopsis (Arabidopsis thaliana). Illumina high-throughput sequencing revealed 879 GCN5-regulated candidate genes potentially involved in iron homeostasis. Chromatin immunoprecipitation assays indicated that five genes (At3G08040, At2G01530, At2G39380, At2G47160, and At4G05200) are direct targets of GCN5 in iron homeostasis regulation. Notably, GCN5-mediated acetylation of histone 3 lysine 9 and histone 3 lysine 14 of FERRIC REDUCTASE DEFECTIVE3 (FRD3) determined the dynamic expression of FRD3. Consistent with the function of FRD3 as a citrate efflux protein, the iron retention defect in gcn5 was rescued and fertility was partly restored by overexpressing FRD3. Moreover, iron retention in gcn5 roots was significantly reduced by the exogenous application of citrate. Collectively, these data suggest that GCN5 plays a critical role in FRD3-mediated iron homeostasis. Our results provide novel insight into the chromatin-based regulation of iron homeostasis in Arabidopsis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Arabidopsis / enzymology*
  • Arabidopsis / genetics
  • Arabidopsis / physiology
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Base Sequence
  • Gene Expression Regulation, Plant*
  • High-Throughput Nucleotide Sequencing
  • Histone Acetyltransferases / genetics*
  • Histone Acetyltransferases / metabolism
  • Histones / genetics*
  • Histones / metabolism
  • Homeostasis
  • Iron / metabolism*
  • Membrane Transport Proteins / genetics*
  • Membrane Transport Proteins / metabolism
  • Molecular Sequence Data
  • Mutation
  • Phenotype
  • Plant Roots / enzymology
  • Plant Roots / genetics
  • Plant Roots / physiology
  • Sequence Analysis, DNA

Substances

  • Arabidopsis Proteins
  • FRD3 protein, Arabidopsis
  • Histones
  • Membrane Transport Proteins
  • Iron
  • GCN5 protein, Arabidopsis
  • Histone Acetyltransferases

Associated data

  • SRA/SRP049039