Real-Time LAMP for Chalara fraxinea Diagnosis

Methods Mol Biol. 2015:1302:75-83. doi: 10.1007/978-1-4939-2620-6_6.

Abstract

Chalara fraxinea is the causal agent of ash dieback, a disease affecting Fraxinus excelsior and F. angustifolia across Europe. Loop-mediated isothermal amplification (LAMP) is a rapid, DNA-based method which can be used for specific detection of plant pathogens in infected material. The combination of a rapid LAMP assay for C. fraxinea with a simple sample preparation method in a user-friendly kit format raises the potential for testing to be carried out away from conventional laboratory facilities, to expedite measure to manage this damaging disease.

MeSH terms

  • Ascomycota / classification
  • Ascomycota / genetics
  • Ascomycota / isolation & purification*
  • Ascomycota / pathogenicity
  • DNA, Fungal / analysis*
  • DNA, Fungal / genetics
  • Fraxinus / genetics*
  • Fraxinus / microbiology
  • Nucleic Acid Amplification Techniques / methods*
  • Plant Diseases / microbiology*
  • Species Specificity

Substances

  • DNA, Fungal