The complete mitochondrial genome of Kaloula rugifera (Amphibia, Anura, Microhylidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3391-2. doi: 10.3109/19401736.2015.1018235. Epub 2015 May 11.

Abstract

We determined the complete mitochondrial genome of Kaloula rugifera in this work. The mitogenome was 17,073 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region (D-loop). The base composition of the light strand was 29.7% A, 30.4% T, 25.7% C and 14.2% G. The gene order and contents of it is identical to most amphibian mitogenome. All protein-coding genes began with ATG as start codon except ND1 gene beginning with GTG and COI gene beginning with ATA. Five protein-coding genes (COII, ATP 6, COIII, ND3 and ND4) ended with incomplete stop codon T. The 22 tRNA genes with the size ranging from 65 bp to 73 bp were interspersed along the whole genome. The D-loop region containing tandem repetition was 1675 bp in length and heavily biased to A + T nucleotides.

Keywords: Kaloula rugifera; Microhylidae; mitochondrial genome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Anura / genetics*
  • Base Composition
  • Codon, Initiator / genetics
  • Codon, Terminator / genetics
  • Electron Transport Complex IV / genetics
  • Genome, Mitochondrial*
  • NADH Dehydrogenase / genetics
  • Open Reading Frames
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Tandem Repeat Sequences

Substances

  • Codon, Initiator
  • Codon, Terminator
  • RNA, Ribosomal
  • RNA, Transfer
  • NADH Dehydrogenase
  • Electron Transport Complex IV