Improvement of enzymatic saccharification yield in Arabidopsis thaliana by ectopic expression of the rice SUB1A-1 transcription factor

PeerJ. 2015 Mar 3:3:e817. doi: 10.7717/peerj.817. eCollection 2015.

Abstract

Saccharification of polysaccharides releases monosaccharides that can be used by ethanol-producing microorganisms in biofuel production. To improve plant biomass as a raw material for saccharification, factors controlling the accumulation and structure of carbohydrates must be identified. Rice SUB1A-1 is a transcription factor that represses the turnover of starch and postpones energy-consuming growth processes under submergence stress. Arabidopsis was employed to test if heterologous expression of SUB1A-1 or SUB1C-1 (a related gene) can be used to improve saccharification. Cellulolytic and amylolytic enzymatic treatments confirmed that SUB1A-1 transgenics had better saccharification yield than wild-type (Col-0), mainly from accumulated starch. This improved saccharification yield was developmentally controlled; when compared to Col-0, young transgenic vegetative plants yielded 200-300% more glucose, adult vegetative plants yielded 40-90% more glucose and plants in reproductive stage had no difference in yield. We measured photosynthetic parameters, starch granule microstructure, and transcript abundance of genes involved in starch degradation (SEX4, GWD1), juvenile transition (SPL3-5) and meristematic identity (FUL, SOC1) but found no differences to Col-0, indicating that starch accumulation may be controlled by down-regulation of CONSTANS and FLOWERING LOCUS T by SUB1A-1 as previously reported. SUB1A-1 transgenics also offered less resistance to deformation than wild-type concomitant to up-regulation of AtEXP2 expansin and BGL2 glucan-1,3,-beta-glucosidase. We conclude that heterologous SUB1A-1 expression can improve saccharification yield and softness, two traits needed in bioethanol production.

Keywords: Bioenergy; Bioethanol; Biomass; Cell wall; SUBMERGENCE1; Starch; Transcription factor.

Grants and funding

This work was supported by the Secretaría de Educación Pública, Consejo Nacional de Ciencia y Tecnología de México (http://www.conacyt.mx) Jóvenes Investigadores Ciencia Básica 152643 to Julian Mario Peña-Castro and 169619 to Blanca Estela Barrera-Figueroa and Secretaría de Educación Pública, Programa de Mejoramiento del Profesorado (http://dsa.sep.gob.mx) Nuevos Profesores de Tiempo Completo 103.5/11/6720 to Julian Mario Peña-Castro and Blanca Estela Barrera-Figueroa. Lizeth Núñez-López received a fellowship from the Secretaría de Educación Pública, Programa de Mejoramiento del Profesorado. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.