Whole mitochondrial genome sequencing and analysis for rat squamous cell carcinoma tissue cell

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2143-4. doi: 10.3109/19401736.2014.982597. Epub 2014 Dec 26.

Abstract

Mitochondrial genome plays a central role in aging, cancer, apoptosis and metabolism. Squamous cell carcinoma is one of the major types of non-small cell lung cancer. We sequenced a complete mitochondrial genome sequence of a rat squamous cell carcinomas cell tissue for the first time. The total length of the mitochondrial genome was 16,319 bp, with 13 protein-coding genes, two ribosomal RNA genes and 22 transfer RNA genes. This genome describing information will supply the potential use of mtDNA mutations as markers in cancer.

Keywords: Cancer; mitochondrial genome; squamous cell carcinoma.

MeSH terms

  • Animals
  • Base Sequence
  • Carcinoma, Squamous Cell / genetics*
  • DNA, Mitochondrial / genetics
  • Genes, Mitochondrial
  • Genome, Mitochondrial*
  • Polymorphism, Single Nucleotide / genetics
  • Rats, Inbred F344
  • Sequence Analysis, DNA*
  • Whole Genome Sequencing*

Substances

  • DNA, Mitochondrial