Experimental and theoretical studies on halide binding with a p-xylyl-based azamacrocycle

J Phys Chem A. 2015 Jan 15;119(2):383-94. doi: 10.1021/jp511040p. Epub 2015 Jan 6.

Abstract

A p-xylyl-based macrocycle L has been synthesized and its binding properties with halides have been investigated by (1)H NMR titrations, single crystal X-ray diffraction analysis, and density functional theory (DFT) calculations. As investigated by (1)H NMR titrations, the ligand preferentially binds a halide in a 1:2 binding mode, with the association constants (in log K2) of 2.82, 2.70, 2.28, and 2.20 for fluoride, chloride, bromide, and iodide, respectively. The overall binding trend was found to be in the order of fluoride > chloride > bromide > iodide, reflecting that the binding strength correlates with the relative basicity and size of the respective halide. Crystallographic studies indicate that the ligand forms 1:2 complexes with chloride, bromide and iodide. In the chloride complex, the ligand is hexaprotonated and each chloride is held via three NH···Cl(-) bonds. The ligand is tetraprotonated for the other complexes, where each halide is H-bonded to two secondary ammonium NH(+) groups via NH···X(-) bonds. The results of DFT calculations performed on [H6L](6+) at M062x/6-311G (d,p) level in both gas and solvent phases, suggest that the ligand binds halides with the binding energy in the order of F(-) > Cl(-) > Br(-) > I(-), supporting the experimental data obtained from (1)H NMR studies. Results from DFT calculations further indicate that a 1:2 binding is energetically more favorable than a 1:1 binding of the ligand.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Aza Compounds / chemical synthesis
  • Aza Compounds / chemistry*
  • Bromides / chemistry*
  • Chlorides / chemistry*
  • Crystallography, X-Ray
  • Fluorides / chemistry*
  • Gases / chemistry
  • Hydrogen Bonding
  • Iodides / chemistry*
  • Ligands
  • Macrocyclic Compounds / chemical synthesis
  • Macrocyclic Compounds / chemistry*
  • Models, Chemical
  • Molecular Structure
  • Proton Magnetic Resonance Spectroscopy
  • Protons
  • Solvents / chemistry
  • Thermodynamics

Substances

  • Aza Compounds
  • Bromides
  • Chlorides
  • Gases
  • Iodides
  • Ligands
  • Macrocyclic Compounds
  • Protons
  • Solvents
  • Fluorides