The complete chloroplast genome sequence of the Korean endemic plant Scrophularia takesimensis

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2058-9. doi: 10.3109/19401736.2014.982555. Epub 2014 Nov 24.

Abstract

The chloroplast genome sequence of Scrophularia takesimensis (Scrophulariaceae) was determined in this study. The cpDNA was 152,425 bp in length, containing a pair of 25,478 bp inverted repeat regions (IR), which were separated by small and large single copy region (SSC and LSC) of 17,938 bp and 83,531 bp, respectively. There are total of 113 genes in the genome, including 79 protein coding genes, 29 tRNA genes, 4 rRNA genes. 18 genes encoded one or two introns. The overall AT contents of the cpDNA were 61.9% and in the LSC, SSC and IR regions were 63.8%, 67.8% and 56.8%, respectively.

Keywords: Chloroplast genome; Scrophularia takesimensis; Scrophulariaceae.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition / genetics
  • Base Pairing / genetics
  • Base Sequence
  • Chromosome Mapping
  • DNA, Chloroplast / genetics
  • DNA, Circular / genetics
  • Genes, Chloroplast
  • Genome, Chloroplast*
  • Scrophularia / genetics*

Substances

  • DNA, Chloroplast
  • DNA, Circular