Electrostatic analysis of bacterial expansins

Proteins. 2015 Feb;83(2):215-23. doi: 10.1002/prot.24718. Epub 2014 Nov 28.

Abstract

Expansins are a family of proteins with plant cell wall remodeling-activity, which bind cell wall components through hydrophobic and electrostatic interactions. A shallow area on the surface of the protein serves as the polysaccharide binding site (PBS) and it is composed of conserved residues. However, electric charge differences on the opposite face of the PBS produce basic, neutral, or acidic proteins. An analysis of forty-four bacterial expansins, homologues of BsEXLX1, revealed two main groups defined by: (a) the presence or absence of disulfide bonds; and (b) by the proteins isoelectric point (pI). We determined the location of the residues responsible for the pI on the structure of representative expansins. Our results suggest that the electric charge at the opposite site of the PBS may help in substrate differentiation among expansins from different species; in addition, electrostatic polarization between the front and the back of the molecule could affect expansin activity on cellulose.

Keywords: cellulose; electric charge; expansins; isoelectric point; plant cell wall.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Conserved Sequence
  • Electrochemistry
  • Isoelectric Point
  • Models, Molecular
  • Phylogeny
  • Plant Proteins / chemistry*
  • Protein Structure, Tertiary
  • Sequence Analysis, Protein
  • Surface Properties

Substances

  • Bacterial Proteins
  • Plant Proteins
  • expansin protein, plant