Days to heading 7, a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice

Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):16337-42. doi: 10.1073/pnas.1418204111. Epub 2014 Nov 5.

Abstract

Success of modern agriculture relies heavily on breeding of crops with maximal regional adaptability and yield potentials. A major limiting factor for crop cultivation is their flowering time, which is strongly regulated by day length (photoperiod) and temperature. Here we report identification and characterization of Days to heading 7 (DTH7), a major genetic locus underlying photoperiod sensitivity and grain yield in rice. Map-based cloning reveals that DTH7 encodes a pseudo-response regulator protein and its expression is regulated by photoperiod. We show that in long days DTH7 acts downstream of the photoreceptor phytochrome B to repress the expression of Ehd1, an up-regulator of the "florigen" genes (Hd3a and RFT1), leading to delayed flowering. Further, we find that haplotype combinations of DTH7 with Grain number, plant height, and heading date 7 (Ghd7) and DTH8 correlate well with the heading date and grain yield of rice under different photoperiod conditions. Our data provide not only a macroscopic view of the genetic control of photoperiod sensitivity in rice but also a foundation for breeding of rice cultivars better adapted to the target environments using rational design.

Keywords: DTH7; flowering time; grain yield; photoperiod sensitivity; rice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptation, Physiological
  • Agrobacterium tumefaciens / genetics
  • Biomass
  • Cloning, Molecular
  • Crosses, Genetic
  • Gene Expression Regulation, Plant
  • Genes, Plant*
  • Genetic Vectors / genetics
  • Haplotypes / genetics
  • Oryza / genetics*
  • Oryza / growth & development
  • Oryza / radiation effects
  • Photoperiod*
  • Plant Growth Regulators / genetics
  • Plant Proteins / genetics
  • Plant Proteins / physiology*
  • Quantitative Trait Loci*
  • Recombinant Fusion Proteins / metabolism
  • Time Factors

Substances

  • Plant Growth Regulators
  • Plant Proteins
  • Recombinant Fusion Proteins