Computational and functional characterization of Angiogenin mutations, and correlation with amyotrophic lateral sclerosis

PLoS One. 2014 Nov 5;9(11):e111963. doi: 10.1371/journal.pone.0111963. eCollection 2014.

Abstract

The Angiogenin (ANG) gene is frequently mutated in patients suffering from the neurodegenerative disease--amyotrophic lateral sclerosis (ALS). Most of the ALS-causing mutations in Angiogenin affect either its ribonucleolytic or nuclear translocation activity. Here we report the functional characterization of two previously uncharacterized missense mutations in Angiogenin--D22G and L35P. We predict the nature of loss-of-function(s) in these mutants through our previously established Molecular Dynamics (MD) simulation extended to 100 ns, and show that the predictions are entirely validated through biochemical studies with wild-type and mutated proteins. Based on our studies, we provide a biological explanation for the loss-of-function of D22G-Angiogenin leading to ALS, and suggest that the L35P-Angiogenin mutation would probably cause ALS symptoms in individuals harboring this mutation. Our study thus highlights the strength of MD simulation-based predictions, and suggests that this method can be used for correlating mutations in Angiogenin or other effector proteins with ALS symptoms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Amyotrophic Lateral Sclerosis / genetics*
  • Humans
  • Models, Molecular*
  • Mutation
  • Mutation, Missense*
  • Protein Structure, Tertiary
  • Ribonuclease, Pancreatic / chemistry*
  • Ribonuclease, Pancreatic / genetics*

Substances

  • angiogenin
  • Ribonuclease, Pancreatic

Grants and funding

This work was supported by the Department of Science and Technology (SERB/F/6185/2013-14), Government of India. A.K.P. was supported by a Senior Research Fellowship from the Council of Scientific and Industrial Research (CSIR), while M.B. was supported by the Ramalingaswami Fellowship from the Department of Biotechnology (DBT), Government of India. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.