Genome-wide miRNA profiling in myelodysplastic syndrome with del(5q) treated with lenalidomide

Eur J Haematol. 2015 Jul;95(1):35-43. doi: 10.1111/ejh.12458. Epub 2014 Nov 11.

Abstract

Objectives: Lenalidomide is a potent drug with pleiotropic effects in patients with myelodysplastic syndrome (MDS) with deletion of the long arm of chromosome 5 [del(5q)]. We investigated its effect on regulation of microRNA (miRNA) expression profiles in del(5q) patients with MDS in vivo.

Methods: We used miRNA expression microarrays to study changes in miRNA levels in peripheral blood CD14+ monocytes collected from patients before and during lenalidomide treatment and compared them with those from healthy donors.

Results: Before treatment, we observed strong upregulation of pro-apoptotic miR-34a and miR-34a* that diminished during lenalidomide exposure. Upregulation of HOX-related miR-196b and erythroid-specific miR-451 seen in untreated patients remained unchanged after the treatment. At the time of hematologic response, expression of several miRNAs clustering to the 14q32 locus was reduced. Additionally, we focused more deeply on miRNAs from the 5q commonly deleted region and found that levels of miR-378 and miR-378* followed haploinsufficiency trend.

Conclusions: This report describes changes in miRNA expression in del(5q) patients with MDS treated with lenalidomide, likely arising from deregulation of pathways implicated in lenalidomide action.

Keywords: del(5q); lenalidomide; miRNA; myelodysplastic syndromes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Anemia, Macrocytic / drug therapy*
  • Anemia, Macrocytic / genetics
  • Anemia, Macrocytic / metabolism
  • Anemia, Macrocytic / pathology
  • Case-Control Studies
  • Chromosome Deletion
  • Chromosomes, Human, Pair 14
  • Chromosomes, Human, Pair 5 / genetics
  • Chromosomes, Human, Pair 5 / metabolism
  • Female
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic*
  • Genetic Loci
  • Genome-Wide Association Study
  • Haploinsufficiency
  • Humans
  • Immunologic Factors / therapeutic use*
  • Lenalidomide
  • Leukocytes, Mononuclear / drug effects
  • Leukocytes, Mononuclear / metabolism
  • Leukocytes, Mononuclear / pathology
  • Male
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Middle Aged
  • Myelodysplastic Syndromes / drug therapy*
  • Myelodysplastic Syndromes / genetics
  • Myelodysplastic Syndromes / metabolism
  • Myelodysplastic Syndromes / pathology
  • Primary Cell Culture
  • RNA Splicing
  • Signal Transduction
  • Thalidomide / analogs & derivatives*
  • Thalidomide / therapeutic use

Substances

  • Immunologic Factors
  • MIRN196 microRNA, human
  • MIRN34 microRNA, human
  • MIRN378 microRNA, human
  • MIRN451 microRNA, human
  • MicroRNAs
  • Thalidomide
  • Lenalidomide

Supplementary concepts

  • Chromosome 5q Deletion Syndrome