Trainable COSFIRE filters for vessel delineation with application to retinal images

Med Image Anal. 2015 Jan;19(1):46-57. doi: 10.1016/j.media.2014.08.002. Epub 2014 Sep 3.

Abstract

Retinal imaging provides a non-invasive opportunity for the diagnosis of several medical pathologies. The automatic segmentation of the vessel tree is an important pre-processing step which facilitates subsequent automatic processes that contribute to such diagnosis. We introduce a novel method for the automatic segmentation of vessel trees in retinal fundus images. We propose a filter that selectively responds to vessels and that we call B-COSFIRE with B standing for bar which is an abstraction for a vessel. It is based on the existing COSFIRE (Combination Of Shifted Filter Responses) approach. A B-COSFIRE filter achieves orientation selectivity by computing the weighted geometric mean of the output of a pool of Difference-of-Gaussians filters, whose supports are aligned in a collinear manner. It achieves rotation invariance efficiently by simple shifting operations. The proposed filter is versatile as its selectivity is determined from any given vessel-like prototype pattern in an automatic configuration process. We configure two B-COSFIRE filters, namely symmetric and asymmetric, that are selective for bars and bar-endings, respectively. We achieve vessel segmentation by summing up the responses of the two rotation-invariant B-COSFIRE filters followed by thresholding. The results that we achieve on three publicly available data sets (DRIVE: Se=0.7655, Sp=0.9704; STARE: Se=0.7716, Sp=0.9701; CHASE_DB1: Se=0.7585, Sp=0.9587) are higher than many of the state-of-the-art methods. The proposed segmentation approach is also very efficient with a time complexity that is significantly lower than existing methods.

Keywords: COSFIRE; Delineation; Retinal image analysis; Trainable filters; Vessel segmentation.

MeSH terms

  • Algorithms
  • Artificial Intelligence*
  • Fluorescein Angiography / methods*
  • Humans
  • Image Enhancement / methods
  • Image Interpretation, Computer-Assisted / methods*
  • Observer Variation
  • Pattern Recognition, Automated / methods*
  • Reproducibility of Results
  • Retinal Diseases / pathology*
  • Retinal Vessels / pathology*
  • Sensitivity and Specificity