Genetic alterations of chromosome 8 genes in oral cancer

Sci Rep. 2014 Aug 15:4:6073. doi: 10.1038/srep06073.

Abstract

The clinical relevance of DNA copy number alterations in chromosome 8 were investigated in oral cancers. The copy numbers of 30 selected genes in 33 OSCC patients were detected using the multiplex ligation-dependent probe amplification (MLPA) technique. Amplifications of the EIF3E gene were found in 27.3% of the patients, MYC in 18.2%, RECQL4 in 15.2% and MYBL1 in 12.1% of patients. The most frequent gene losses found were the GATA4 gene (24.2%), FGFR1 gene (24.2%), MSRA (21.2) and CSGALNACT1 (12.1%). The co-amplification of EIF3E and RECQL4 was found in 9% of patients and showed significant association with alcohol drinkers. There was a significant association between the amplification of EIF3E gene with non-betel quid chewers and the negative lymph node status. EIF3E amplifications did not show prognostic significance on survival. Our results suggest that EIF3E may have a role in the carcinogenesis of OSCC in non-betel quid chewers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carcinoma, Squamous Cell / genetics*
  • Chromosome Aberrations
  • Chromosomes, Human, Pair 8 / genetics*
  • DNA Copy Number Variations / genetics*
  • Female
  • GATA4 Transcription Factor / genetics
  • Gene Dosage / genetics*
  • Humans
  • Male
  • Methionine Sulfoxide Reductases / genetics
  • Mouth Neoplasms / genetics*
  • N-Acetylgalactosaminyltransferases / genetics
  • Receptor, Fibroblast Growth Factor, Type 1 / genetics

Substances

  • GATA4 Transcription Factor
  • GATA4 protein, human
  • Methionine Sulfoxide Reductases
  • methionine sulfoxide reductase
  • N-Acetylgalactosaminyltransferases
  • chondroitin sulfate N-acetylgalactosaminyltransferase-1
  • FGFR1 protein, human
  • Receptor, Fibroblast Growth Factor, Type 1