Centrifugal ultrafiltration-HPLC method for interaction analysis between lectins and sugars

Methods Mol Biol. 2014:1200:173-83. doi: 10.1007/978-1-4939-1292-6_16.

Abstract

The centrifugal ultrafiltration-HPLC method is a simple and rapid method for analyzing the binding interaction between lectins and sugars (oligosaccharides). In this method, a lectin is mixed with a fluorescent-labeled oligosaccharide in buffer and the unbound oligosaccharide recovered by centrifugal ultrafiltration is isolated and quantified by high-performance liquid chromatography. The binding activity is defined as a ratio (percentage) of the amount of bound oligosaccharide to that added, where the former is obtained by subtracting the amount of unbound oligosaccharide from the latter. The oligosaccharide-binding specificity of a lectin can be determined by comparing the binding activities with a variety of fluorescent-labeled oligosaccharides. The association constant and the optimum pH and temperature of the binding interaction between lectins and fluorescent-labeled oligosaccharides can be easily analyzed by this method.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amination
  • Centrifugation / methods*
  • Chromatography, High Pressure Liquid / methods*
  • Fluorescent Dyes / chemistry
  • Fluorometry
  • Kinetics
  • Lectins / metabolism*
  • Oligosaccharides / chemistry
  • Oligosaccharides / isolation & purification*
  • Oligosaccharides / metabolism*
  • Protein Binding
  • Substrate Specificity
  • Temperature
  • Ultrafiltration / methods*

Substances

  • Fluorescent Dyes
  • Lectins
  • Oligosaccharides