Cloning and transcriptional activity analysis of the porcine cofilin 2 gene promoter

Gene. 2014 Sep 1;547(2):280-7. doi: 10.1016/j.gene.2014.06.058. Epub 2014 Jun 26.

Abstract

Cofilins (CFL), including CFL1 and CFL2, are members of the family of actin-binding proteins in eukaryote. CFL2 is predominantly expressed in mammalian skeletal muscle and heart and is important to muscle fiber formation and muscular regeneration. To study transcriptional regulation of porcine CFL2, a 2.5 kb upstream sequence starting from the major CFL2 transcriptional start site was cloned by genome walking. Twelve DNA fragments of the 5' flank region of the porcine CFL2 gene were further isolated from porcine genomic DNA via PCR and inserted into the luciferase reporter vector pGL4.10 to make 12 CFL2 reporter constructs. All reporter vectors were transfected into C2C12, NIH3T3, or Hela cells and their relative luciferase activity measured after 48 h, respectively. Bioinformatics analysis suggested that there were two TATA-boxes at the -508 bp and -453 bp, as well as a GC-box and a CAAT-box in this sequence. Additional transcription factor binding sites including SP1, AP1, AP2, and GATA-1 sites were also predicted. The transcriptional activity of pGL4.10-1554 (1502 bp to +51 bp) was the strongest, and the promoter's active region was mapped to a region from -1502 bp to -1317 bp. Our data provide a foundation for future studies into transcriptional regulation of CFL2.

Keywords: CFL2; Genome walking; Luciferase reporter gene; Promoter; Sequence analysis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Cloning, Molecular
  • Cofilin 2 / genetics*
  • Cofilin 2 / metabolism
  • HeLa Cells
  • Humans
  • Mice
  • Molecular Sequence Data
  • NIH 3T3 Cells
  • Promoter Regions, Genetic*
  • Swine
  • Transcription, Genetic

Substances

  • Cofilin 2