Nonlinear signalling networks and cell-to-cell variability transform external signals into broadly distributed or bimodal responses

J R Soc Interface. 2014 Sep 6;11(98):20140383. doi: 10.1098/rsif.2014.0383.

Abstract

We show theoretically and experimentally a mechanism behind the emergence of wide or bimodal protein distributions in biochemical networks with nonlinear input-output characteristics (the dose-response curve) and variability in protein abundance. Large cell-to-cell variation in the nonlinear dose-response characteristics can be beneficial to facilitate two distinct groups of response levels as opposed to a graded response. Under the circumstances that we quantify mathematically, the two distinct responses can coexist within a cellular population, leading to the emergence of a bimodal protein distribution. Using flow cytometry, we demonstrate the appearance of wide distributions in the hypoxia-inducible factor-mediated response network in HCT116 cells. With help of our theoretical framework, we perform a novel calculation of the magnitude of cell-to-cell heterogeneity in the dose-response obtained experimentally.

Keywords: bimodality; cell heterogeneity; dose–response; signalling networks.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Amino Acids, Dicarboxylic / chemistry
  • Cell Communication
  • Gene Expression Regulation, Neoplastic
  • HCT116 Cells
  • Humans
  • Hypoxia-Inducible Factor 1, alpha Subunit / metabolism
  • Models, Theoretical
  • Oxygen / metabolism
  • Proteins / chemistry*
  • Signal Transduction*

Substances

  • Amino Acids, Dicarboxylic
  • Hypoxia-Inducible Factor 1, alpha Subunit
  • Proteins
  • Oxygen
  • oxalylglycine