Switching a newly discovered lactonase into an efficient and thermostable phosphotriesterase by simple double mutations His250Ile/Ile263Trp

Biotechnol Bioeng. 2014 Oct;111(10):1920-30. doi: 10.1002/bit.25272. Epub 2014 Jul 14.

Abstract

OPHC2 is a thermostable organophosphate (OP) hydrolase in the β-lactamase superfamily. OPs are highly toxic synthetic chemicals with no natural analogs. How did OPHC2 acquire phosphotriesterase (PTE) activity remained unclear. In this study, an OPHC2 analogue, PoOPH was discovered from Pseudomonas oleovorans exhibiting high lactonase and esterase activities and latent PTE activity. Sequence analysis revealed conserved His250 and Ile263 and site-directed mutagenesis at these crucial residues enhanced PTE activity. The best variant PoOPHM2 carrying H250I/I263W mutations displayed 6,962- and 106-fold improvements in catalytic efficiency for methyl-parathion and ethyl-paraoxon degradation, whereas the original lactonase and esterase activities decreased dramatically. A 1.4 × 10(7) -fold of specificity inversion was achieved by only two residue substitutions. Significantly, thermostability of the variants was not compromised. Crystal structure of PoOPHM2 was determined at 2.25 Å resolution and docking studies suggested that the two residues in the binding pocket determine substrate recognition. Lastly, new organophosphorus hydrolases (OPHs) were discovered using simple double mutations. Among them, PpOPHM2 from Pseudomonas putida emerged as a new promising OPH with very high activity (41.0 U mg(-1) ) toward methyl-parathion. Our results offer a first scrutiny to PTE activity evolution of OPHs in β-lactamase superfamily and provide efficient and robust enzymes for OP detoxification.

Keywords: X-ray crystallography; functional switch; lactonase; organophosphate; phosphotriesterase; site-directed mutagenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Aryldialkylphosphatase / chemistry*
  • Aryldialkylphosphatase / genetics
  • Aryldialkylphosphatase / metabolism
  • Crystallography, X-Ray
  • Molecular Docking Simulation
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Phosphoric Triester Hydrolases / chemistry*
  • Phosphoric Triester Hydrolases / genetics
  • Phosphoric Triester Hydrolases / metabolism
  • Protein Conformation
  • Protein Stability
  • Pseudomonas oleovorans / chemistry
  • Pseudomonas oleovorans / enzymology*
  • Pseudomonas oleovorans / genetics
  • Sequence Alignment
  • Substrate Specificity
  • beta-Lactamases / chemistry*
  • beta-Lactamases / genetics
  • beta-Lactamases / metabolism

Substances

  • Phosphoric Triester Hydrolases
  • Aryldialkylphosphatase
  • beta-Lactamases