The complete mitochondrial genome of Taeniogonalos taihorina (Bischoff) (Hymenoptera: Trigonalyidae) reveals a novel gene rearrangement pattern in the Hymenoptera

Gene. 2014 Jun 10;543(1):76-84. doi: 10.1016/j.gene.2014.04.003. Epub 2014 Apr 5.

Abstract

The family Trigonalyidae is considered to be one of the most basal lineages in the suborder Apocrita of Hymenoptera. Here, we determine the first complete mitochondrial genome of the Trigonalyidae, from the species Taeniogonalos taihorina (Bischoff, 1914). This mitochondrial genome is 15,927bp long, with a high A+T-content of 84.60%. It contains all of the 37 typical animal mitochondrial genes and an A+T-rich region. The orders and directions of all genes are different from those of previously reported hymenopteran mitochondrial genomes. Eight tRNA genes, three protein-coding genes and the A+T-rich region were rearranged, with the dominant gene rearrangement events being translocation and local inversion. The arrangements of three tRNA clusters, trnY-trnM-trnI-trnQ, trnW-trnL2-trnC, and trnH-trnA-trnR-trnN-trnS-trnE-trnF, and the position of the cox1 gene, are novel to the Hymenoptera, even the insects. Six long intergenic spacers are present in the genome. The secondary structures of the RNA genes are normal, except for trnS2, in which the D-stem pairing is absent.

Keywords: Gene rearrangement; Intergenic spacer; Mitochondrial genome; Secondary structure; Taeniogonalos taihorina.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition
  • Base Sequence
  • Female
  • Gene Order
  • Gene Rearrangement*
  • Genes, Insect
  • Genes, Mitochondrial
  • Genome, Mitochondrial*
  • Hymenoptera / genetics*
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • RNA / genetics
  • RNA, Mitochondrial
  • Sequence Analysis, DNA

Substances

  • RNA, Mitochondrial
  • RNA