Genomics and bioinformatics resources for translational science in Rosaceae

Plant Biotechnol Rep. 2014;8(2):49-64. doi: 10.1007/s11816-013-0282-3. Epub 2013 May 21.

Abstract

Recent technological advances in biology promise unprecedented opportunities for rapid and sustainable advancement of crop quality. Following this trend, the Rosaceae research community continues to generate large amounts of genomic, genetic and breeding data. These include annotated whole genome sequences, transcriptome and expression data, proteomic and metabolomic data, genotypic and phenotypic data, and genetic and physical maps. Analysis, storage, integration and dissemination of these data using bioinformatics tools and databases are essential to provide utility of the data for basic, translational and applied research. This review discusses the currently available genomics and bioinformatics resources for the Rosaceae family.

Keywords: Bioinformatics; Breeding; Database; Genetics; Genomics; Rosaceae.

Publication types

  • Review