Complete mitochondrial genome of catfish Sperata seenghala (Sykes, 1839) (Siluriformes, Bagridae) from Indus River Sindh, Pakistan

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):387-8. doi: 10.3109/19401736.2014.895998. Epub 2014 Mar 11.

Abstract

Complete mitochondrial genome of catfish, Sperata seenghala, was isolated by LA PCR (TakaRa LAtaq, Dalian, China); and sequenced by Sanger's method to obtain the complete mitochondrial genome, which is listed Critically Endangered and red listed species. The complete mitogenome was 16,588 bp in length and contains 13 typical vertebrate protein-coding genes, 2 rRNA and 22 tRNA genes. The whole genome base composition was estimated to be 31.28% A, 27.80% C, 15.31% G, and 25.57% T. The complete mitochondrial genome of catfish, Sperata seenghala provides the fundamental tools for genetic breeding and conservation studies.

Keywords: Endangered; Sperata seenghala; mitochondrial genome; river Indus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence / genetics
  • Catfishes / genetics*
  • DNA, Mitochondrial / genetics
  • Fresh Water
  • Genome, Mitochondrial*
  • Molecular Sequence Data
  • Rivers
  • Sequence Analysis, DNA / veterinary

Substances

  • DNA, Mitochondrial

Associated data

  • GENBANK/AB907556