Structural and mechanistic insights into an extracytoplasmic copper trafficking pathway in Streptomyces lividans

Biochem J. 2014 May 1;459(3):525-38. doi: 10.1042/BJ20140017.

Abstract

In Streptomyces lividans an extracytoplasmic copper-binding Sco protein plays a role in two unlinked processes: (i) initiating a morphological development switch and (ii) facilitating the co-factoring of the CuA domain of CcO (cytochrome c oxidase). How Sco obtains copper once secreted to the extracytoplasmic environment is unknown. In the present paper we report on a protein possessing an HX₆MX₂₁HXM motif that binds a single cuprous ion with subfemtomolar affinity. High-resolution X-ray structures of this extracytoplasmic copper chaperone-like protein (ECuC) in the apo- and Cu(I)-bound states reveal that the latter possesses a surface-accessible cuprous-ion-binding site located in a dish-shaped region of β-sheet structure. A cuprous ion is transferred under a favourable thermodynamic gradient from ECuC to Sco with no back transfer occurring. The ionization properties of the cysteine residues in the Cys⁸⁶xxxCys⁹⁰ copper-binding motif of Sco, together with their positional locations identified from an X-ray structure of Sco, suggests a role for Cys⁸⁶ in initiating an inter-complex ligand-exchange reaction with Cu(I)-ECuC. Generation of the genetic knockouts, Δsco, Δecuc and Δsco/ecuc, and subsequent in vivo assays lend support to the existence of a branched extracytoplasmic copper-trafficking pathway in S. lividans. One branch requires both Sco and to a certain extent ECuC to cofactor the CuA domain, whereas the other uses only Sco to deliver copper to a cuproenzyme to initiate morphological development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Substitution
  • Apoproteins / chemistry
  • Apoproteins / genetics
  • Apoproteins / metabolism
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Biological Transport
  • Carrier Proteins / chemistry
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism*
  • Copper / metabolism*
  • Crystallography, X-Ray
  • Cysteine / chemistry
  • Electron Transport Complex IV / chemistry
  • Electron Transport Complex IV / metabolism
  • Gene Knockout Techniques
  • Kinetics
  • Membrane Proteins / chemistry
  • Membrane Proteins / genetics
  • Membrane Proteins / metabolism*
  • Metallochaperones / chemistry
  • Metallochaperones / genetics
  • Metallochaperones / metabolism*
  • Models, Molecular*
  • Molecular Sequence Data
  • Mutant Proteins / chemistry
  • Mutant Proteins / metabolism
  • Protein Conformation
  • Protein Structure, Tertiary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Sequence Alignment
  • Streptomyces lividans / enzymology
  • Streptomyces lividans / growth & development
  • Streptomyces lividans / metabolism*

Substances

  • Apoproteins
  • Bacterial Proteins
  • Carrier Proteins
  • Membrane Proteins
  • Metallochaperones
  • Mutant Proteins
  • Recombinant Proteins
  • copper-binding protein
  • Copper
  • Electron Transport Complex IV
  • Cysteine

Associated data

  • PDB/3ZJA
  • PDB/3ZK0
  • PDB/4BPY