Transient down-regulation of the RNA silencing machinery increases efficiency of Agrobacterium-mediated transformation of Arabidopsis

Plant Biotechnol J. 2014 Jun;12(5):590-600. doi: 10.1111/pbi.12165. Epub 2014 Jan 28.

Abstract

Agrobacterium tumefaciens is a plant pathogen that is widely used in plant transformation. As the process of transgenesis includes the delivery of single-stranded T-DNA molecule, we hypothesized that transformation rate may negatively correlate with the efficiency of the RNA-silencing machinery. Using mutants compromised in either the transcriptional or post-transcriptional gene-silencing pathways, two inhibitors of stable transformation were revealed-AGO2 and NRPD1a. Furthermore, an immunoprecipitation experiment has shown that NRPD1, a subunit of Pol IV, directly interacts with Agrobacterium T-DNA in planta. Using the Tobacco rattle virus (TRV)--based virus-induced gene silencing (VIGS) technique, we demonstrated that the transient down-regulation of the expression of either AGO2 or NRPD1a genes in reproductive organs of Arabidopsis, leads to an increase in transformation rate. We observed a 6.0- and 3.5-fold increase in transformation rate upon transient downregulation of either AGO2 or NRPD1a genes, respectively. This is the first report demonstrating the increase in the plant transformation rate via VIGS-mediated transient down-regulation of the components of epigenetic machinery in reproductive tissue.

Keywords: AGO2; Arabidopsis thaliana; NRPD1a; epigenetics; plant transformation; virus-induced gene silencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agrobacterium / physiology*
  • Arabidopsis / genetics*
  • Arabidopsis / microbiology*
  • Arabidopsis Proteins / metabolism
  • Blotting, Southern
  • DNA Breaks, Double-Stranded
  • DNA Methylation / genetics
  • DNA, Bacterial / genetics
  • DNA-Directed RNA Polymerases / metabolism
  • Down-Regulation*
  • Epigenesis, Genetic
  • Genes, Plant
  • Genetic Loci
  • Models, Genetic
  • Mutation / genetics
  • Plants, Genetically Modified
  • Protein Binding
  • Protein Subunits / metabolism
  • RNA Interference*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Small Interfering / metabolism
  • Reverse Genetics
  • Transformation, Genetic*

Substances

  • Arabidopsis Proteins
  • DNA, Bacterial
  • Protein Subunits
  • RNA, Messenger
  • RNA, Small Interfering
  • T-DNA
  • DNA-Directed RNA Polymerases
  • NRPD1A protein, Arabidopsis