40LoVe and Samba are involved in Xenopus neural development and functionally distinct from hnRNP AB

PLoS One. 2014 Jan 15;9(1):e85026. doi: 10.1371/journal.pone.0085026. eCollection 2014.

Abstract

Heterogeneous nuclear ribonucleoproteins (hnRNPs) comprise a large group of modular RNA-binding proteins classified according to their conserved domains. This modular nature, coupled with a large choice of alternative splice variants generates functional diversity. Here, we investigate the biological differences between 40LoVe, its splice variant Samba and its pseudoallele hnRNP AB in neural development. Loss of function experiments lead to defects in neural development with reduction of eye size, which stem primarily from increased apoptosis and reduced proliferation in neural tissues. Despite very high homology between 40LoVe/Samba and hnRNP AB, these proteins display major differences in localization, which appear to be in part responsible for functional differences. Specifically, we show that the 40Love/Samba carboxy-terminal domain (GRD) enables nucleocytoplasmic shuttling behavior. This domain is slightly different in hnRNP AB, leading to nuclear-restricted localization. Finally, we show that shuttling is required for 40LoVe/Samba function in neural development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Heterogeneous-Nuclear Ribonucleoprotein Group A-B / chemistry
  • Heterogeneous-Nuclear Ribonucleoprotein Group A-B / metabolism
  • Heterogeneous-Nuclear Ribonucleoprotein Group A-B / physiology*
  • Heterogeneous-Nuclear Ribonucleoproteins / chemistry
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism
  • Heterogeneous-Nuclear Ribonucleoproteins / physiology*
  • In Situ Hybridization
  • In Situ Nick-End Labeling
  • Molecular Sequence Data
  • Nervous System / growth & development*
  • Nervous System / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Homology, Amino Acid
  • Xenopus
  • Xenopus Proteins / chemistry
  • Xenopus Proteins / metabolism
  • Xenopus Proteins / physiology*

Substances

  • HNRNPAB protein, Xenopus
  • Heterogeneous-Nuclear Ribonucleoprotein Group A-B
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Xenopus Proteins
  • samba protein, Xenopus

Grants and funding

This work was funded by Cyprus Research Promotion Foundation (ΑΝΑBΑΘΜΙΣΗ/0609/28) and co-funded by the Structural Funds of the European Union. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.