Mucilaginibacter polytrichastri sp. nov., isolated from a moss (Polytrichastrum formosum), and emended description of the genus Mucilaginibacter

Int J Syst Evol Microbiol. 2014 Apr;64(Pt 4):1395-1400. doi: 10.1099/ijs.0.055335-0. Epub 2014 Jan 16.

Abstract

A Gram-staining-negative, rod-shaped, non-spore-forming bacterium, designated strain RG4-7(T), was isolated from the moss Polytrichastrum formosum collected from Gawalong glacier in Tibet, China, and characterized by using a polyphasic taxonomic approach. The predominant fatty acids of strain RG4-7(T) were summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), iso-C15 : 0 and iso-C17 : 0 3-OH. The major polar lipids were phosphatidylethanolamine, one unidentified aminophospholipid, one unidentified phospholipid, two unidentified aminolipids and one unidentified lipid. Strain RG4-7(T) contained MK-7 as the dominant menaquinone and the G+C content of its genomic DNA was 39.1 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain RG4-7(T) was affiliated to species of the genus Mucilaginibacter, and its closest relative was Mucilaginibacter jinjuensis YC7004(T) (97.0 % sequence similarity). However, the DNA-DNA relatedness between this strain and strain RG4-7(T) was only 49.1±3.7 %. Based on phylogenetic inference and phenotypic data, strain RG4-7(T) is considered to represent a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter polytrichastri sp. nov. is proposed. The type strain is RG4-7(T) ( = CGMCC 1.12493(T) = DSM 26907(T)). An emended description of the genus Mucilaginibacter is also proposed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Bacteroidetes / classification*
  • Bacteroidetes / genetics
  • Bacteroidetes / isolation & purification
  • Base Composition
  • Bryophyta / microbiology*
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Ice Cover
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phospholipids / chemistry
  • Phylogeny*
  • Pigmentation
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Tibet
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 7

Associated data

  • GENBANK/JQ772481