Construction of an infectious cDNA clone of Enterovirus 71: insights into the factors ensuring experimental success

Natallia V Lazouskaya; Enzo A Palombo; Chit-Laa Poh; Peter A Barton

doi:10.1016/j.jviromet.2013.12.005

Construction of an infectious cDNA clone of Enterovirus 71: insights into the factors ensuring experimental success

J Virol Methods. 2014 Mar:197:67-76. doi: 10.1016/j.jviromet.2013.12.005. Epub 2013 Dec 20.

Authors

Natallia V Lazouskaya¹, Enzo A Palombo², Chit-Laa Poh³, Peter A Barton²

Affiliations

¹ Environment and Biotechnology Centre, Faculty of Life and Social Sciences, Swinburne University of Technology, John Street, Hawthorn, Victoria 3122, Australia. Electronic address: laz.natallia@gmail.com.
² Environment and Biotechnology Centre, Faculty of Life and Social Sciences, Swinburne University of Technology, John Street, Hawthorn, Victoria 3122, Australia.
³ Environment and Biotechnology Centre, Faculty of Life and Social Sciences, Swinburne University of Technology, John Street, Hawthorn, Victoria 3122, Australia; Faculty of Science and Technology, Sunway University, 46150 Petaling Jaya, Selangor Darul Ehsan, Malaysia.

Abstract

Enterovirus 71 (EV 71) is a causative agent of mild Hand Foot and Mouth Disease but is capable of causing severe complications in the CNS in young children. Reverse genetics technology is currently widely used to study the pathogenesis of the virus. The aim of this work was to determine and evaluate the factors which can contribute to infectivity of EV 71 RNA transcripts in vitro. Two strategies, overlapping RT-PCR and long distance RT-PCR, were employed to obtain the full-length genome cDNA clones of the virus. The length of the poly(A) tail and the presence of non-viral 3'-terminal sequences were studied in regard to their effects on infectivity of the in vitro RNA transcripts of EV 71 in cell culture. The data revealed that only cDNA clones obtained after long distance RT-PCR were infectious. No differences were observed in virus titres after transfection with in vitro RNA harbouring a poly(A) tail of 18 or 30 adenines in length, irrespective of the non-viral sequences at the 3'-terminus.

Keywords: Enterovirus 71; In vitro RNA; Long distance RT-PCR; Overlapping RT-PCR; Poly(A) tail; cDNA clone.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Animals
Chlorocebus aethiops
DNA, Complementary / genetics*
Enterovirus A, Human / genetics*
Enterovirus A, Human / physiology
Genome, Viral
Hand, Foot and Mouth Disease / virology*
RNA, Messenger
Reverse Genetics / methods*
Transfection
Vero Cells

Substances

DNA, Complementary
RNA, Messenger