Permanent draft genomes of the Rhodopirellula maiorica strain SM1

Michael Richter; Tim Richter-Heitmann; Anna Klindworth; Carl-Eric Wegner; Carsten S Frank; Jens Harder; Frank Oliver Glöckner

doi:10.1016/j.margen.2013.11.001

Permanent draft genomes of the Rhodopirellula maiorica strain SM1

Mar Genomics. 2014 Feb:13:19-20. doi: 10.1016/j.margen.2013.11.001. Epub 2013 Nov 25.

Authors

Michael Richter¹, Tim Richter-Heitmann², Anna Klindworth³, Carl-Eric Wegner⁴, Carsten S Frank⁵, Jens Harder⁶, Frank Oliver Glöckner³

Affiliations

¹ Max Planck Institute for Marine Microbiology, Microbial Genomics and Bioinformatics Research Group, Bremen, Germany.
² Max Planck Institute for Marine Microbiology, Microbial Genomics and Bioinformatics Research Group, Bremen, Germany; Max Planck Institute for Marine Microbiology, Department of Microbiology, Bremen, Germany.
³ Max Planck Institute for Marine Microbiology, Microbial Genomics and Bioinformatics Research Group, Bremen, Germany; Jacobs University Bremen, School of Engineering and Science, Bremen, Germany.
⁴ Max Planck Institute for Marine Microbiology, Microbial Genomics and Bioinformatics Research Group, Bremen, Germany; Max Planck Institute for Terrestrial Microbiology, Department of Biogeochemistry, Marburg, Germany.
⁵ Max Planck Institute for Marine Microbiology, Department of Microbiology, Bremen, Germany.
⁶ Max Planck Institute for Marine Microbiology, Department of Microbiology, Bremen, Germany. Electronic address: jharder@mpi-bremen.de.

PMID: 24286833
DOI: 10.1016/j.margen.2013.11.001

Abstract

The genome of Rhodopirellula maiorica strain SM1 was sequenced as a permanent draft to complement the full genome sequence of the type strain Rhodopirellula baltica SH1(T). This isolate is part of a larger study to infer the biogeography of Rhodopirellula species in European marine waters, as well as to amend the genus description of R. baltica. This genomics resource article is the fifth of a series of five publications reporting in total eight new permanent daft genomes of Rhodopirellula species.

Keywords: Biogeography; Diversity; Planctomycetes; Rhodopirellula baltica SH1(T).

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Base Sequence
Cluster Analysis
Data Mining
Genome, Bacterial / genetics*
Genomics
Geologic Sediments / microbiology*
Molecular Sequence Annotation
Molecular Sequence Data
Phylogeography
Planctomycetales / classification*
Planctomycetales / genetics*
Sequence Analysis, DNA
Spain

Associated data

GENBANK/ANOG00000000