Automated interhemispheric surface extraction in T1-weighted MRI using intensity and symmetry information

J Neurosci Methods. 2014 Jan 30:222:97-105. doi: 10.1016/j.jneumeth.2013.11.007. Epub 2013 Nov 15.

Abstract

Background: Localizing the human interhemispheric region is of interest in image analysis mainly because it can be used for hemisphere separation and as a preprocessing step for interhemispheric structure localization. Many existing methods focus on only one of these applications.

New method: Here a new Intensity and Symmetry based Interhemispheric Surface extraction method (ISIS) that enables both applications is presented. A combination of voxel intensity and local symmetry is used to optimize a surface from T1-weighted MRI.

Results: ISIS was evaluated in regard to cerebral hemisphere separation using manual segmentations. It was also evaluated in regard to being a preprocessing step for interhemispheric structure localization using manually placed landmarks.

Comparison with existing methods: Results were compared to cerebral hemisphere separations by BrainVisa and Freesurfer as well as to a midsagittal plane (MSP) extraction method. ISIS had less misclassified voxels than BrainVisa (ISIS: 0.119±0.114%, BrainVisa: 0.138±0.084%, p=0.020). Freesurfer had less misclassified voxels than ISIS for one dataset (ISIS: 0.063±0.056%, Freesurfer: 0.049±0.044%, p=0.019), but failed to produce usable results for another. Total voxel distance from all manual landmarks did not differ significantly between ISIS and the MSP method (ISIS: 4.00±1.88, MSP: 4.47±4.97).

Conclusions: ISIS was found successful in both cerebral hemisphere separation and as a preprocessing step for interhemispheric structure localization. It needs no time consuming preprocessing and extracts the interhemispheric surface in less than 30 s.

Keywords: Anterior commissure; Graph cut; Hemisphere separation; Interhemispheric surface; Midsagittal plane; Posterior commissure.

Publication types

  • Comparative Study
  • Evaluation Study

MeSH terms

  • Aged
  • Aged, 80 and over
  • Artifacts
  • Brain / anatomy & histology*
  • Cerebral Aqueduct / anatomy & histology
  • Databases, Factual
  • Electronic Data Processing
  • Head
  • Humans
  • Image Processing, Computer-Assisted*
  • Magnetic Resonance Imaging / methods*
  • Neural Pathways / anatomy & histology
  • Septum Pellucidum / anatomy & histology
  • Software
  • Time