N-glycosylation patterns in two α-l-arabinofuranosidases from Penicillium canescens belonging to the glycoside hydrolase families 51 and 54

Carbohydr Res. 2013 Dec 15:382:71-6. doi: 10.1016/j.carres.2013.08.026. Epub 2013 Sep 7.

Abstract

Using MALDI-TOF mass spectrometry (MS) peptide fingerprinting procedure followed by the analysis of MS data with the GlycoMod tool from the ExPASy proteomic site, N-glycosylation of two GH51 and GH54 family α-l-arabinofuranosidases (Abf51A and Abf54A) from Penicillium canescens was studied. Variable N-linked glycans were identified at five out of eight potential N-glycosylation sites in the Abf51A and one out of three potential N-glycosylation sites in the Abf54A. The discriminated glycans represented high-mannose oligosaccharides (Man)x(GlcNAc)2 with a number of Man residues up to 7 or the products of sequential enzymatic trimming of a high-mannose glycan with α-mannosidases and β-N-acetylhexosaminidases. The Abf54A peptide, containing the Asn254 glycosylation site, and one peptide from the Abf51A, containing the Asn163 glycosylation site, were found to exist not only in glycosylated, but also in a native non-modified form.

Keywords: Glycoproteins; High-mannose glycans; MALDI-TOF mass spectrometry; N-Glycosylation; Penicillium canescens; α-l-Arabinofuranosidase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Carbohydrate Conformation
  • Glycoside Hydrolases / chemistry*
  • Glycoside Hydrolases / genetics
  • Glycoside Hydrolases / metabolism*
  • Glycosylation*
  • Mannose / chemistry
  • Models, Molecular
  • Molecular Sequence Data
  • Penicillium / enzymology*
  • Peptides / chemistry
  • Peptides / metabolism
  • Polysaccharides / chemistry
  • Polysaccharides / metabolism
  • Protein Conformation
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Substances

  • Peptides
  • Polysaccharides
  • Glycoside Hydrolases
  • alpha-N-arabinofuranosidase
  • Mannose

Associated data

  • GENBANK/KF478992
  • GENBANK/KF482902