Mespeus--a database of metal interactions with proteins

Methods Mol Biol. 2014:1091:333-42. doi: 10.1007/978-1-62703-691-7_23.

Abstract

Modeling and analogy are commonly used to identify the part that a metal may play in the structure or function of a new protein which has been recognized by structural genomics. Mespeus ( http://mespeus.bch.ed.ac.uk/MESPEUS_10/) lists metal protein interactions whose geometry has been experimentally determined and allows them to be visualized. This can contribute to the modeling process. The use of Mespeus is described with a series of examples.

MeSH terms

  • Databases, Protein*
  • Metalloproteins / chemistry
  • Metals / chemistry*
  • Metals / metabolism
  • Models, Molecular
  • Protein Binding
  • Protein Conformation
  • Proteins / chemistry*
  • Proteins / metabolism
  • Web Browser*

Substances

  • Metalloproteins
  • Metals
  • Proteins