Molecular cloning, characterization, and heterologous expression of a new κ-carrageenase gene from marine bacterium Zobellia sp. ZM-2

Appl Microbiol Biotechnol. 2013 Dec;97(23):10057-67. doi: 10.1007/s00253-013-5215-0. Epub 2013 Oct 3.

Abstract

κ-Carrageenases exhibit apparent distinctions in gene sequence, molecular weight, enzyme properties, and posttranslational processes. In this study, a new κ-carrageenase gene named cgkZ was cloned from the marine bacterium Zobellia sp. ZM-2. The gene comprised an open reading frame of 1,638 bp and encoded 545 amino acids. The natural signal peptide of κ-carrageenase was used successfully for the secretory production of the recombinant enzyme in Escherichia coli. A posttranslational process that removes an amino acid sequence of about 20 kDa from the C-terminal end of κ-carrageenase was first discovered in E. coli. An increase in enzyme activity by 167.3% in the presence of 5 mM DTT was discovered, and Na(+) at a certain concentration range was positively correlated with enzyme activity. The κ-carrageenase production of E. coli was 9.0 times higher than that of ZM-2. These results indicate the potential use of the enzyme in the biotechnological industry.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification*
  • Bacterial Proteins / metabolism
  • Cloning, Molecular*
  • Enzyme Stability
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Fermentation
  • Flavobacteriaceae / classification
  • Flavobacteriaceae / enzymology*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification
  • Gene Expression
  • Glycoside Hydrolases / chemistry*
  • Glycoside Hydrolases / genetics
  • Glycoside Hydrolases / isolation & purification*
  • Glycoside Hydrolases / metabolism
  • Kinetics
  • Molecular Sequence Data
  • Molecular Weight
  • Phylogeny
  • Protein Sorting Signals
  • Seawater / microbiology*
  • Sequence Alignment
  • Substrate Specificity

Substances

  • Bacterial Proteins
  • Protein Sorting Signals
  • Glycoside Hydrolases

Associated data

  • GENBANK/KC503903
  • GENBANK/KC503904