Genetic characterisation of infectious bursal disease virus isolates in Ethiopia

Acta Trop. 2014 Feb;130(100):39-43. doi: 10.1016/j.actatropica.2013.09.025. Epub 2013 Oct 18.

Abstract

The objective of the investigation was to characterise infectious bursal disease viruses (IBDV) circulating in commercial and breeding poultry farms in Ethiopia between 2009 and 2011. The nucleotide and deduced amino acid sequence for VP2 hypervariable region of ten IBDVs were determined by RT-PCR, sequenced and compared to well characterised IBDV isolates worldwide. IBDV genetic material was amplified directly from bursa or cell passaged material. Phylogenetically, Ethiopian IBDVs represented two genetic lineages: very virulent (vv) IBDVs or variants of the classical attenuated vaccine strain (D78). The nucleotide identity between Ethiopian vvIBDVs ranged between 0% and 2.6%. Ethiopian vvIBDVs are clustered phylogenetically with the African IBDV genetic lineage, independent of the Asian/European lineage. This report demonstrates the circulation of vvIBDV in commercial and breeding poultry farms in Ethiopia.

Keywords: Infectious bursal disease; Phylogenetic; RT-PCR; Sequencing; VP2; vvIBDV.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Birnaviridae Infections / veterinary
  • Birnaviridae Infections / virology
  • Capsid Proteins / chemistry
  • Capsid Proteins / genetics*
  • Chickens
  • Ethiopia
  • Infectious bursal disease virus / classification
  • Infectious bursal disease virus / genetics*
  • Molecular Sequence Data
  • Phylogeny
  • Poultry Diseases / virology

Substances

  • Capsid Proteins