Calculation of the energy deposition in nanovolumes by protons and HZE particles: geometric patterns of initial distributions of DNA repair foci

Phys Med Biol. 2013 Sep 21;58(18):6393-405. doi: 10.1088/0031-9155/58/18/6393. Epub 2013 Sep 2.

Abstract

The biological effects of high-linear energy transfer (LET) radiation are different from those caused by low-LET radiation due to the difference in the patterns of energy deposition in cells. In this work, we studied the role of the track structure in the spatial distribution of radiation-induced double-strand breaks (DSBs). In the first part, the irradiation of a cubic volume of 12 µm of side by 300 MeV protons (LET ∼0.3 keV µm(-1)) and by 1 GeV/amu iron ion particles (LET∼150 keV µm(-1)) was simulated with the Monte Carlo code RITRACKS (relativistic ion tracks) and the dose was calculated in voxels of different sizes. In the second part, dose calculations were combined with chromosomes simulated by a random walk (RW) model to assess the formation of DSBs. The number of DSBs was calculated as a function of the dose and particle fluence for 1 GeV protons, 293 MeV/u carbon, and 1 GeV/u iron particles. Finally, the DSB yield was obtained as a function of the LET for protons, helium, and carbon. In general, the number and distribution of calculated DSBs were similar to experimental DNA repair foci data. From this study, we concluded that a stochastic model combining nanoscopic dose calculations and chromosomes simulated by RWs is a useful approach to study radiation-induced DSBs.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Algorithms
  • Chromosome Aberrations
  • Chromosomes / ultrastructure
  • Computer Simulation
  • Cosmic Radiation
  • DNA / radiation effects*
  • DNA Breaks, Double-Stranded*
  • DNA Repair*
  • Dose-Response Relationship, Radiation
  • Humans
  • Monte Carlo Method
  • Probability
  • Protons
  • Stochastic Processes

Substances

  • Protons
  • DNA