Monitoring the activity of single translocons

J Mol Biol. 2013 Nov 15;425(22):4145-53. doi: 10.1016/j.jmb.2013.08.012. Epub 2013 Aug 20.

Abstract

Recent studies introduced a novel view that the SecYEG translocon functions as a monomer and interacts with the dimeric SecA ATPase, which fuels the preprotein translocation reaction. Here, we used nanodisc-reconstituted SecYEG to characterize the functional properties of single copies of the translocon. Using a method based on intermolecular Förster resonance energy transfer, we show for the first time that isolated nanodisc-reconstituted SecYEG monomers support preprotein translocation. When several copies of SecYEG were co-reconstituted within a nanodisc, no change in translocation kinetics was observed, suggesting that SecYEG oligomers do not facilitate enhanced translocation. In contrast, nanodisc-reconstituted monomers of the PrlA4 variant of SecYEG showed increased translocation rates. Experiments based on intramolecular Förster resonance energy transfer within the nanodisc-isolated monomeric SecYEG demonstrated a nucleotide-dependent opening of the channel upon interaction with SecA. In conclusion, the nanodisc-reconstituted SecYEG monomers are functional for preprotein translocation and provide a new prospect for single-molecule analysis of dynamic aspects of protein translocation.

Keywords: DDM; FCCS; FCS; FRET; Förster resonance energy transfer; SEC; fluorescence correlation spectroscopy; fluorescence cross-correlation spectroscopy; membrane proteins; n-dodecyl β-d-maltoside; protein dynamics; protein oligomerization; protein transport; secretion; size-exclusion chromatography.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Detergents
  • Escherichia coli Proteins / chemistry
  • Escherichia coli Proteins / metabolism*
  • Molecular Dynamics Simulation
  • Protein Binding
  • Protein Conformation
  • Protein Multimerization
  • Protein Transport
  • SEC Translocation Channels
  • Solutions

Substances

  • Detergents
  • Escherichia coli Proteins
  • SEC Translocation Channels
  • Solutions