Expression, purification and preliminary X-ray crystallographic analysis of nitroalkane oxidase (NAO) from Pseudomonas aeruginosa

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Aug;69(Pt 8):888-90. doi: 10.1107/S1744309113017235. Epub 2013 Jul 27.

Abstract

Nitroalkane oxidase (NAO) is a flavin-dependent enzyme which catalyses the oxidation of nitroalkanes to the corresponding aldehydes or ketones, nitrite and hydrogen peroxide. In order to better understand the structure and function of this enzyme, NAO from Pseudomonas aeruginosa was purified and crystallized as a native and a selenomethionine-substituted (SeMet) enzyme. Both crystals diffracted to a resolution of 1.9 Å and belonged to the primitive orthorhombic space group P2₁, with unit-cell parameters a = 70.06, b = 55.43, c = 87.74 Å, β = 96.56° for native NAO and a = 69.89, b = 54.83, c = 88.20 Å, β = 95.79° for SeMet NAO. Assuming the presence of two molecules in the asymmetric unit in both crystals, the Matthews coefficients (VM) for native and SeMet NAO were calculated to be 2.30 and 2.48 ų Da⁻¹, with estimated solvent contents of 46.50 and 50.37%, respectively.

Keywords: NAO; Pseudomonas aeruginosa; nitro compounds; nitroalkane oxidase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics*
  • Crystallography, X-Ray
  • Dioxygenases / biosynthesis*
  • Dioxygenases / chemistry*
  • Dioxygenases / genetics
  • Gene Expression Regulation, Bacterial*
  • Pseudomonas aeruginosa / enzymology*

Substances

  • Bacterial Proteins
  • Dioxygenases
  • 2-nitropropane dioxygenase