Homologous 2',5'-phosphodiesterases from disparate RNA viruses antagonize antiviral innate immunity

Proc Natl Acad Sci U S A. 2013 Aug 6;110(32):13114-9. doi: 10.1073/pnas.1306917110. Epub 2013 Jul 22.

Abstract

Efficient and productive virus infection often requires viral countermeasures that block innate immunity. The IFN-inducible 2',5'-oligoadenylate (2-5A) synthetases (OASs) and ribonuclease (RNase) L are components of a potent host antiviral pathway. We previously showed that murine coronavirus (MHV) accessory protein ns2, a 2H phosphoesterase superfamily member, is a phosphodiesterase (PDE) that cleaves 2-5A, thereby preventing activation of RNase L. The PDE activity of ns2 is required for MHV replication in macrophages and for hepatitis. Here, we show that group A rotavirus (RVA), an important cause of acute gastroenteritis in children worldwide, encodes a similar PDE. The RVA PDE forms the carboxy-terminal domain of the minor core protein VP3 (VP3-CTD) and shares sequence and predicted structural homology with ns2, including two catalytic HxT/S motifs. Bacterially expressed VP3-CTD exhibited 2',5'-PDE activity, which cleaved 2-5A in vitro. In addition, VP3-CTD expressed transiently in mammalian cells depleted 2-5A levels induced by OAS activation with poly(rI):poly(rC), preventing RNase L activation. In the context of recombinant chimeric MHV expressing inactive ns2, VP3-CTD restored the ability of the virus to replicate efficiently in macrophages or in the livers of infected mice, whereas mutant viruses expressing inactive VP3-CTD (H718A or H798R) were attenuated. In addition, chimeric viruses expressing either active ns2 or VP3-CTD, but not nonfunctional equivalents, were able to protect ribosomal RNA from RNase L-mediated degradation. Thus, VP3-CTD is a 2',5'-PDE able to functionally substitute for ns2 in MHV infection. Remarkably, therefore, two disparate RNA viruses encode proteins with homologous 2',5'-PDEs that antagonize activation of innate immunity.

Keywords: Nidovirales; RNA capping enzyme; Reoviridae; interferon-stiumulated gene.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 2',5'-Oligoadenylate Synthetase / immunology
  • 2',5'-Oligoadenylate Synthetase / metabolism
  • Adenine Nucleotides / metabolism
  • Amino Acid Sequence
  • Animals
  • Binding Sites / genetics
  • Binding Sites / immunology
  • Capsid Proteins / genetics
  • Capsid Proteins / immunology
  • Capsid Proteins / metabolism
  • Cell Line
  • Cells, Cultured
  • Endoribonucleases / genetics
  • Endoribonucleases / immunology
  • Endoribonucleases / metabolism
  • Host-Pathogen Interactions / immunology
  • Humans
  • Immunity, Innate / immunology*
  • Immunoblotting
  • Macrophages / immunology
  • Macrophages / metabolism
  • Macrophages / virology
  • Mice
  • Mice, Knockout
  • Molecular Sequence Data
  • Murine hepatitis virus / immunology
  • Murine hepatitis virus / metabolism
  • Murine hepatitis virus / physiology
  • Mutation
  • Oligoribonucleotides / metabolism
  • Phosphoric Diester Hydrolases / genetics
  • Phosphoric Diester Hydrolases / immunology*
  • Phosphoric Diester Hydrolases / metabolism
  • RNA Virus Infections / immunology
  • RNA Virus Infections / virology
  • RNA Viruses / immunology*
  • RNA Viruses / metabolism
  • RNA Viruses / physiology
  • Rotavirus / immunology
  • Rotavirus / metabolism
  • Rotavirus / physiology
  • Sequence Homology, Amino Acid
  • Viral Nonstructural Proteins / genetics
  • Viral Nonstructural Proteins / immunology*
  • Viral Nonstructural Proteins / metabolism

Substances

  • Adenine Nucleotides
  • Capsid Proteins
  • Oligoribonucleotides
  • VP3 protein, Rotavirus
  • Viral Nonstructural Proteins
  • 2',5'-oligoadenylate
  • 2',5'-Oligoadenylate Synthetase
  • Endoribonucleases
  • 2-5A-dependent ribonuclease
  • Phosphoric Diester Hydrolases